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NMRPipe Installation Files from NIST IBBR NMRPipe is an extensive software system for processing, analyzing, and exploiting multidimensional NMR spectroscopic data. This site contains NMRPipe installation files, as well as demo data with example processing and analysis schemes for conventional and Non-Uniformly Sampled (NUS) spectra. BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us. The first word is the name of the program we want to run - nmrPipe, remaining words are options passed with the program. If you have nmrPipe already installed and your shell 'knows' where nmrPipe can be found in the file system, shell will try to run nmrPipe with the arguments that you provide.

NMRPipe is now distributed via a new site at the Institute of Bioscience and BiotechnologyResearch. This NIH website is no longer updated.

The new distribution site is here (www.nmrpipe.com redirects to the new site too):

www.ibbr.umd.edu/nmrpipe

LEGACY VERSION, NO LONGER UPDATED
NMRPipe Installation Guide, Install Files, and Sample Data
November 24 2015

NMRPipe is an extensive software system for processing, analyzing, and exploiting NMR spectroscopic data. This web page contains NMRPipe installation files, as well as demo data with example processing andanalysis schemes.The main web site for the software, with links to tutorials and documentation is:

http://spin.niddk.nih.gov/NMRPipe

In addition, there are several web-based applications for manipulatingchemical shifts, dipolar couplings, Small-Angle X-Ray Scatteringdata, and molecular structures. The applications include web-based servers for TALOS+, TALOS-N, and SPARTA+ chemical shift analysis. You can find the various servers here:

http://spin.niddk.nih.gov/bax/nmrserver

The NMRPipe system is officially unsupported by the NIHand without warranties or guarantees of any kind.There is an unofficial mailing list for information on use and features of NMRPipe .. you can join and post your ownquestions and comments by going to the following web page:

http://groups.yahoo.com/neo/groups/nmrpipe/info

Some previous versions of NMRPipe have an expiration date. To override the expiration date, try the following environment variable setting:

The following are GENERAL REQUIREMENTS for installing and using NMRPipe:

A working knowledge of UNIX, including use of a text editor, andcreation of shell scripts.
One of the required UNIX systems such as Linux (most all PC versions), Mac OS X, or SFU 3.5 for Windows XP Pro.
The system used for installation must be 32-bit compatible. This means that64-bit systems must have 32-bit compatibility libraries installed as needed.
A user account with C-shell (/bin/csh or /bin/tcsh) as the default shell.
X11 Graphics server and the xterm terminal window.
A three-button scroll-wheel mouse or its equivalent.

The installation of NMRPipe posted here provides the followingfeatures and versions:

Standard Options, including nmrPipe, nmrDraw, nmrWish, TALOS+, SPARTA+,DC, MFR, DYNAMO, ACME.
Conversion tools for Bruker, Varian, and other formats.
NMRPipe for Linux: version linux9(Fedora Core 9, glibc2.8, 32-bit) and version linux (Fedora Core 4, glibc2.3, 32-bit). These Linux versions of NMRPiperequire 32-bit compatibility libraries when used on64-bit systems. The install procedure will automaticallychoose the NMRPipe Linux version that is suitable, so NMRPipe can be installed on most versions of Linux currently in use.
A 64-bit version of NMRPipe: linux212_64(CentOS 6.5, glibc2.12, 64-bit). This 64-bit version will only be installedif you include the option +type linux212_64 for theinstall.com installation script.The version of the nmrDraw graphical interface included is still the 32-bit version,and no 64-bit version of nmrDraw will be produced. So wheninstalling 64-bit versions of NMRPipe, 32-bit compatibilitylibraries will still be required. Information on how to installrequired libraries for recent CentOS and Ubuntu systems is provided belowin the System-Specific Installation Notes for Linux.
NMRPipe for Mac OS X Intel/PPC (version mac, built on Mac OS X 10.5.8 gcc 4.0.1 XQuartz 2.6.3).
NMRPipe for Windows XP Pro running SFU 3.5 (version winxp).
NMRPipe for SGI Irix (version sgi6x, built on Irix 6.5 for mips2).
NMRPipe Sparc Solaris (version sol, built on SunOS 5.6).
C Source Code for programs which read, write, and interpret the NMRPipedata format (directory format in the installation).
C Source Code for Creating NMRPipe Plug-In Functions (directory nmruserin the installation).

NMRPipe Installation Files

When downloading software from this web site, you are agreeing toour Terms of Use, including the termsthat there is no right to privacy on this system, and that thethe software from this web site is not to be redistributed without permission from the author.

Use care when downloading; depending on settings, certain web browsers may try to unpack a given file, convert it to a different text format, or display it as a web page rather than saving it as a file. If you experience such problems, try different methods for downloading and saving thefiles, or use a different web browser if possible.

Note well that if the file contents or names are changed in any way during download, the install procedure will not work:

When downloading, be sure to retain the exact file name shown here,renaming if needed!
When downloading, check that the final file size matches the size shown here exactly!

Windows Internet Explorer: Right-Click, 'Save Target As'
Linux Mozilla: Right-Click, 'Save Link As' ..if a .com file is displayed as a web page, use 'File/Save As'.
Mac OS X Safari: Right-Click, 'Download Linked File (As)'

File Number	File Name	Required	Post Date	File Size	Contents
File 1	NMRPipeX.tZ	Yes	Nov 24, 2015	86,276,925 bytes	NMRPipe executables and files for Linux and Mac (Version 8.7 Rev 2015.320.15.26)
File 2	install.com	Yes	Nov 24, 2015	46,104 bytes	Install script
File 3	binval.com	Yes	Nov 24, 2015	3,872 bytes	Used by install script
File 4	plugin.smile.tZ	No	Sep 1, 2016	53,267,711 bytes	SMILE MD NUS Reconstruction
File 5	talos.tZ	No	Nov 24, 2015	192,502,073 bytes	Files required for TALOS-N, TALOS+, and SPARTA+
File 6	dyn.tZ	No	Nov 24, 2015	143,850,933 bytes	Optional Ramachandran surfaces for TALOS+ graphics, PDB data and all files for DYNAMO and MFR
File 7	NMRPipeL.tZ	No	Nov 24, 2015	64,143,867 bytes	NMRPipe legacy executables (SGI, Windows XP Pro, Sparc Solaris)

As an alternative to downloading via a web browser, on linux systems with the command wget available, you can download theinstall files as follows:

On Mac OS X systems, you can download the files with the curl command:

NMRPipe on a Virtual Machine

As an alternative to installing a hardware-specific version of NMRPipe from above,we now also provide a complex installation of NMRPipe on a CentOS 6.5 Linux Virtual Machine. The virtual machine can be run on most any recent Windows PC, Mac OS X system, or even on another version of Linux. The virtual installation requires either VMware Player softwar

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